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CRISPR-HOLMES-based NAD+ detection
Frontiers in Bioengineering and Biotechnology ( IF 5.7 ) Pub Date : 2024-03-25 , DOI: 10.3389/fbioe.2024.1355640 Songkuan Zhuang , Tianshuai Hu , Hongzhong Zhou , Shiping He , Jie Li , Yuehui Zhang , Dayong Gu , Yong Xu , Yijian Chen , Jin Wang
Frontiers in Bioengineering and Biotechnology ( IF 5.7 ) Pub Date : 2024-03-25 , DOI: 10.3389/fbioe.2024.1355640 Songkuan Zhuang , Tianshuai Hu , Hongzhong Zhou , Shiping He , Jie Li , Yuehui Zhang , Dayong Gu , Yong Xu , Yijian Chen , Jin Wang
Studies have indicated that the intracellular nicotinamide adenine dinucleotide (NAD+ ) level is associated with the occurrence and development of many diseases. However, traditional nicotinamide adenine dinucleotide (NAD+ ) detection techniques are time-consuming and may require large and expensive instruments. We recently found that the clustered regularly interspaced short palindromic repeat (CRISPR)-Cas12a protein can be inactivated by AcrVA5-mediated acetylation and reactivated by CobB, using NAD+ as the co-factor. Therefore, in this study, we created a CRISPR-Cas12a-based one-step HOLMES(NAD+ ) system for rapid and convenient NAD+ detection with the employment of both acetylated Cas12a and CobB. In HOLMES(NAD+ ), acetylated Cas12a loses its trans -cleavage activities and can be reactivated by CobB in the presence of NAD+ , cutting ssDNA reporters to generate fluorescence signals. HOLMES(NAD+ ) shows both sensitivity and specificity in NAD+ detection and can be used for quantitative determination of intracellular NAD+ concentrations. Therefore, HOLMES(NAD+ ) not only provides a convenient and rapid approach for target NAD+ quantitation but also expands the application scenarios of HOLMES to non-nucleic acid detection.
中文翻译:
基于 CRISPR-HOLMES 的 NAD+ 检测
研究表明,细胞内烟酰胺腺嘌呤二核苷酸(NAD+ )水平与许多疾病的发生、发展有关。然而,传统的烟酰胺腺嘌呤二核苷酸(NAD+ )检测技术非常耗时,并且可能需要大型且昂贵的仪器。我们最近发现,使用 NAD,聚集的规则间隔短回文重复 (CRISPR)-Cas12a 蛋白可以通过 AcrVA5 介导的乙酰化作用失活,并通过 CobB 重新激活+ 作为辅因子。因此,在本研究中,我们创建了基于 CRISPR-Cas12a 的一步 HOLMES(NAD+ ) 快速便捷的NAD系统+ 使用乙酰化 Cas12a 和 CobB 进行检测。在福尔摩斯(NAD+ ), 乙酰化的 Cas12a 失去其反式 - 裂解活性,并且在 NAD 存在的情况下可以被 CobB 重新激活+ ,切割 ssDNA 报告基因以产生荧光信号。福尔摩斯(NAD+ ) 显示 NAD 的敏感性和特异性+ 检测并可用于细胞内NAD的定量测定+ 浓度。因此,福尔摩斯(NAD+ )不仅为目标NAD提供了方便快捷的方法+ 定量的同时也将HOLMES的应用场景扩展到非核酸检测。
更新日期:2024-03-25
中文翻译:
基于 CRISPR-HOLMES 的 NAD+ 检测
研究表明,细胞内烟酰胺腺嘌呤二核苷酸(NAD