样式: 排序: IF: - GO 导出 标记为已读
-
Isolation and characterization of 35 SNP markers of Leiobagrus kingi (Teleostei, Siluriformes: Amblycipitidae) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-03-22 Wei Li, Xiang-Yang Jia
Leiobagrus kingi is a species endemic to southwest China, it is listed as an endangered species. Due to habitat destruction, over-fishing and water pollution, the wild population of L. kingi has decreased dramatically in recent years. Insufficient molecular markers have limited the effective conservation of this species. In the present study, 35 novel single-nucleotide polymorphism (SNP) markers in
-
Technical note: successful DNA amplification of DNA from non-destructive buccal swabbing in Vespertilionid and Rhinolophid bats Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-03-22 Morgan Hughes, Scott K Brown, Rémi Martin, Christopher H Young, Simon Maddock
Acquiring DNA from wild bats (Mammalia: Chiroptera) is typically undertaken utilizing highly invasive (but non-lethal) sampling techniques comprising wing biopsies and occasional blood samples. While non-invasive sampling is possible through the extraction of DNA from faecal samples, it is not always possible to acquire samples from individual bats whilst conducting fieldwork, and as such, this method
-
Development of polymorphic microsatellite markers for genetic stock identification of green chromide, Etroplus suratensis using next generation sequencing technology Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-03-22 Magdeline Christo, Divya Merin Jose, P. R. Divya, M. U. Rekha, U. K. Sarkar
Thirty polymorphic microsatellites were developed and characterised for the aquaculture important species, Green chromide, Etroplus suratensis through Illumina Sequencing with a mean read quality (Phred score) of 35.8 and the microsatellite primers were designed from the sequenced information, considering various attributes such as the number of repeats, Tm, GC content, Product size, etc. using the
-
Development of a set of SNP markers for population genetics of the sea rose, Pentapora fascialis Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-02-17 M Padrón, M. Milhes, M. Massot, E. Guichoux, Guizien K.
A set of single nucleotide polymorphisms (SNP) was developed from the transcriptome of 10 individuals of the sea rose Pentapora fascialis (Cheilostomata) collected in Banyuls-sur-Mer Bay (NW Mediterranean sea). 53,042 putative SNPs were identified and mapped on a de novo assembled transcriptome. A selected set of 320 SNPs with highest coverage and uniquely mapped in the assembled transcriptome was
-
An improved genetic marker panel for conservation monitoring of upper Kootenay River burbot Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-02-14 Audrey C. Harris, D. Katharine Coykendall, Heather Lamson, Ryan P. Kovach, James L. Dunnigan, Matthew R. Campbell
Burbot populations in the Upper Kootenay watershed, transecting the US-Canada border, are subject to intense monitoring and management after severe declines beginning in the 1970s. Genetic monitoring is a high-priority goal for the East Kootenay Burbot Scientific Working Group, but managers do not currently have a genetic marker panel with enough resolution to understand genetic population structure
-
A IISNPs panel for the giant panda (Ailuropoda melanoleuca) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-02-14 Fujun Shen, Kaile Ning, Wei Xu, Yan Li, Jiawen Liu, Hong Liu, Juan Wang, Liang Zhang, Li Luo, Kongju Wu
The giant panda (Ailuropoda melanoleuca), as an endemic species of China, is also a flagship species of wildlife Conservation. However, the accuracy of individual identification of giant pandas is typically problematic due to the high error rate of microsatellite typing methods. In this study, a panel of 61 SNP makers was developed for individual identification. Of these, 55 polymorphic SNP markers
-
Improved amplification of fecal DNA supports non-invasive microsatellite genotyping of lesser long-nosed bats (Leptonycteris yerbabuenae) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-02-04 John-Lee Sky Walker, Robert J. Steidl, Sandy A. Wolf, Ming-Min Lee, A. Elizabeth Arnold
-
Development, verification, and implementation of an eDNA detection assay for emydids with a case study on diamondback terrapins, Malaclemys terrapin, and red eared slider, Trachemys script elegans Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-02-03 Andrew T. Fields, Elizabeth P. Hunt, Katherine Lanoue, Aaron S. Baxter, Riley S. Sebby, W. Jay Tarkington, David S. Portnoy
-
Validation of a molecular sex marker in three sturgeons from eastern North America Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-01-27
Abstract Despite the importance of sex-specific information for sturgeon conservation and management, sex identification has been a major challenge outside of mature adults on spawning grounds. Recent work identified a sex-specific locus (AllWSex2) that appears to be broadly conserved across many Acipenserids, but the assay was not validated for all species within the family. We tested the AllWSex2
-
Evolutionary stamps for adaptation traced in Cervus nippon genome using reduced representation sequencing Conserv. Genet. Resour. (IF 1.1) Pub Date : 2024-01-27 Nidhi Sukhija, Rangasai Chandra Goli, Mukul Sukhija, Pallavi Rathi, Komal Jaglan, Aishwarya Dash, P. B. Nandhini, K. K. Kanaka
-
Genome-wide identification of simple sequence repeats and development of polymorphic SSR markers in brown trout (Salmo trutta) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-29 Haibing Ma, Tianqing Huang, Wei Gu, Enhui Liu, Gaochao Wang, Bingqian Wang, Jianshe Zhou, Gefeng Xu
In China, the brown trout is a second-level key aquatic wildlife protection animal in the Tibet Autonomous Region. In order to protect the brown trout germplasm resources in the Tibet Autonomous Region, the Institute of Aquatic Sciences of the Academy of Agricultural and Animal Husbandry Sciences of the Tibet Autonomous Region and the Heilongjiang Institute of the Chinese Academy of Aquatic Sciences
-
Isolation and characterization of 55 SNP markers in Triplophysa (Hedinichthys) yarkandensis macroptera Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-27
Abstract Triplophysa (Hedinichthys) yarkandensis macroptera is an endemic species in China, that is mainly distributed in Gansu Province. To date, research on this species has been very limited, focusing mainly on its taxonomy, without any available molecular markers. In the present study, we identified 55 SNP markers in T. (Hedinichthys) yarkandensis macroptera. The minor allele frequency ranged from
-
Development of a multiplex real time-PCR assay to estimate the distribution of the genus Silurus in Lake Biwa using environmental DNA Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-19 Tetsuro Inamoto, Yuu Kishimoto, Hisashi Okuyama, Ryoichi Tabata, Koichiro Nakano, Jun-ichi Takahashi
Three species of catfish, Silurus biwaensis, Silurus lithophilus, and Silurus asotus, are identified in Lake Biwa. Notably, S. biwaensis and S. lithophilus are endemic species in Lake Biwa; however, their detailed distribution and ecology almost remain unknown. In this study, we developed catfish species-specific primer probe sets based on their whole genome. Using these, we analyzed the water samples
-
An amplicon genotyping panel suitable for species identification and population genetics in sauger (Sander canadensis) and walleye (Sander vitreus) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-19
Abstract Sauger (Sander canadensis) and walleye (Sander vitreus) are closely related North American fish species that are often managed by fishery agencies throughout their ranges. However, genotyping resources for sauger are presently limited to a small set of microsatellite loci. We evaluated whether primers in an existing walleye genotyping-in-thousands panel could amplify single nucleotide polymorphism
-
Development and validation of 98 SNP markers in Japanese anchovy, Engraulis japonicus Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-19 Chenghui Song, Yang Liu, Congcong Wang
The Japanese anchovy, Engraulis japonicus, is an important economic fish that is distributed in the northwest Pacific Ocean. The effective assessment and management of the Engraulis japonicus fishery requires reliable information regarding its population’s genetic structure. The recent development of double digest restriction-site associated DNA sequencing (ddRAD-Seq) methods may contribute to the
-
Genetic diversity assessment for reintroduced Przewalski’s horse (Equus ferus) based on newly developed SSR markers Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-18
Abstract Przewalski’s horse (Equus ferus) is a national protected species in China. It first became extinct in the wild in 1976, and was reintroduced to the Kalamaili National Park (KNP) in Xinjiang, China in 2001. This study aimed to analyze the genetic diversity and structure of the reintroduced population of Przewalski’s horse in KNP. Here, we developed and designed microsatellite molecular markers
-
Characterization and cross-species amplification of 33 SNP markers for Liobagrus angullicauda (Teleostei, Siluriformes:Amblycipitidae) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-08 Xiang-Yang Jia, Wei Li, Jun Yan, Ling-Li Xia
Liobagrus angullicauda is an endemic species to streams along the southeast coast in China. Due to over fishing and habitat destruction, the natural population of L. angullicauda has decreased dramatically in recent years. Insufficient molecular markers have limited the effective conservation and management of this species. In the present study, we reported the isolation and characterization of 33
-
Development of 60 SNP markers in Pelodiscus sinensis based on transcriptome sequencing Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-02 Mingsong Xiao, Bing Gong, Huimin Xu, Dandan Ju
The Chinese softshell turtle (Pelodiscus sinensis) is a kind of subaquatic reptile with high nutritional value, medicinal value and economic value. However, the number of wild turtles has dropped dramatically due to excessive fishing and habitat destruction. Artificial breeding of the turtle is facing the dilemma of germplasm degradation and lack of seedlings, which seriously hinders the sustainable
-
Does mesocosm validation of environmental DNA methods translate to natural environment monitoring applications? A case study detecting a high-profile invader; the red eared slider turtle, Trachemys scripta elegans, in Australia Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-02 Jack Rojahn, Alejandro Trujillo-González, Dianne Gleeson, Nathan Cutter, Elise M. Furlan
Environmental DNA (eDNA) surveys have gained popularity as a highly sensitive detection tool that generally outperform traditional detection techniques. eDNA surveys can provide a cost-effective means to identify species’ distributions and recent incursions, informing the control or containment of invasive species. The red-eared slider turtle, Trachemys scripta elegans, is one of the world’s most invasive
-
Isolation and characterization of 48 SNP markers of sleepy cod, Oxyeleotris lineolata by whole-genome resequencing Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-12-02 Jiajia Fan, Dongmei Ma, Huaping Zhu, Minghui Lin, Huanhuan Su, Zaixuan Zhong
The sleepy cod Oxyeleotris lineolata is native to northern Australia. At present, there is little information on the genome information of the sleepy cod. In this study, a total of 48 novel single nucleotide polymorphism (SNP) markers were developed based on whole-genome resequencing. The analysis of the 48 SNP genotypes in 58 fish showed that the observed heterozygosity and expected heterozygosity
-
A size and taxonomic assessment of non-lethal DNA sampling of gastropods using Flinders Technology Associates (FTA) cards Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-22 Kelley Leung
-
Development of SNP markers to identify the sex of the giant panda from naturally degraded fecal samples Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-21 Wei Xu, Daxing Xie, Jie Kou, Xiuyue Zhang, Yan Li, Ye Wang, Liang Zhang, Hong Liu, Jiawen Liu, Juan Wang, Li Luo, Xiaolan Wang, Kongju Wu, Fujun Shen
-
Species identification method by a new non-invasive technique in Korean endangered terrestrial snail, Koreanohadra Koreana (Gastropoda: Mollusca) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-21 Deokjea Cha, Jin-Young Kim, Kang-San Kim, Young-Joong Kim
-
Development and characterization of 68 SNP markers in red sea bream, Pagrus major Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-21 Jeong Gyu Kim, Seung Hyun Yoo, Yong Bae Seo, Jong-Oh Kim, Gun-Do Kim
Red sea bream is a commercially valuable fish that is used as ingredients in the food industry. To prevent a decrease in fishing yield, farmed red sea bream is released. However, this may cause a decrease in the genetic diversity of wild populations, so systematic resource management is required. In this study, 68 single nucleotide polymorphism (SNP) markers were developed using a genotyping-by-sequencing
-
Development of SSR markers in top-mouth culter (Erythroculter ilishaeformis) based on high-throughput sequencing Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-16 Huimin Xu, Bing Gong, Dandan Ju, Mingsong Xiao
The top-mouth culter Erythroculter ilishaeformis is a kind of carnivorous fish that is currently a widely distributed fish in China, which is a commercially important freshwater fish in China. However, only few effective molecular markers on E. ilishaeformis are available. In this study, nine muscles and liver tissues of cDNA libraries of E. ilishaeformis were sequenced using Illumina HiSeq4000 paired-end
-
An R-based tool for identifying sex-linked markers from restriction site-associated DNA sequencing with applications to elasmobranch conservation Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-16 Floriaan Devloo-Delva, Thierry Gosselin, Paul A. Butcher, Peter M. Grewe, Charlie Huveneers, Robin B. Thomson, Jonathan M. Werry, Pierre Feutry
-
Multiplex PCR assay to distinguish among three widespread brown frog species Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-09 Polina Chernigova, Oleg Ermakov, Artem Lisachev, Anton Svinin, Evgeniy Simonov
-
Development of 96 SNP markers for Amorphophallus yuloensis, a species distributed across southwestern China Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-04 Yong Gao, Yanan Zhang, Honglong Chu, Si Yin
Amorphophallus yuloensis is a species endemic to southwestern China. Due to the isolated nature of its karst limestone habitat, this species is found in small and isolated populations. Because wild populations of A. yuloensis are in decline due to human activity, it is necessary to assess genetic diversity among A. yuloensis. A total of 96 single nucleotide polymorphism markers were developed and validated
-
Michael (Mike) William Bruford (6th June 1963–13th April 2023) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-11-01 Benoit Goossens, Pablo Orozco-terWengel
-
Detecting fossorial salamanders using eDNA: Development and validation of quantitative and end-point PCR assays for the detection of five species of Ambystoma Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-10-04 Ben F. Brammell, Elizabeth K. Strasko, Sara A. Brewer, Rebecca R. Piche, Cierla M. Sams, Cy L. Mott, Malinda A. Stull
-
Isolation and characterization of 66 SNP markers in blotched snakehead (Channa maculata) using 2b-RAD sequencing Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-10-04 Lan Liu, Haiyang Liu, Weiwei Xia, Kunci Chen, Qing Luo, Mi Ou, Jian Zhao
Blotched snakehead (Channa maculata) is an economically important aquaculture species in China and Southeast Asia, but wild blotched snakehead resources have declined sharply in recent years because of its overexploitation and habitat destruction. Thus, it is very urgent to develop genetic markers of blotched snakehead to investigate the natural resources. In this study, a total of 66 novel single
-
Development and validation of 105 SNP markers in Chionodraco rastrospinosus Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-10-04 Yewei Yu, Yang Liu, Guoping Zhu, Congcong Wang
Ocellated icefish (Chionodraco rastrospinosus, C. rastrospinosu), plays an essential role in the Antarctic food web, and is mainly distributed at depths of 200-1,000 m in the Southern Ocean. The abundance of this species has been drastically reduced due to various impacts, including overfishing and climate change. Therefore, in order to develop, sustainably exploit and protect this species, it is urgent
-
Isolation and characterization of 73 SNP markers in Schizopygopsis chengi baoxingensis Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-10-04 Mingjiang Song, Yeyu Chen, Xiaoyun Wu, Ya Liu, Feiyang Li, Quan Gong, Jun Ou, Pengcheng Li, Qiaolin Zou, Jiansheng Lai
Schizopygopsis chengi baoxingensis, a species belongs to Schizopygopsis group, is an endemic and rare fish in China. Due to the destruction of the habitat, the natural population of S. c. baoxingensis has decreased dramatically in recent years. Insufficient molecular markers have limited the effective conservation and management of this species. In the present study, we reported the isolation and characterization
-
Development of a MGB probe based qPCR protocol for detecting Pacific cod Gadus macrocephalus in eDNA samples Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-09-26 Woo-Seok Gwak, Kouji Nakayama
The Jinhaeman Bay, located in the South Sea of Korea, is a well-known large-scale Pacific cod (Gadus macrocephalus) spawning ground where it migrates in the winter. We applied an eDNA approach to determine when G. macrocephalus migrates for spawning in the Jinhaeman Bay. We developed novel species-specific primers and minor groove binding (MGB) probe sets for quantitative PCR (qPCR) assays targeting
-
Environmental DNA (eDNA) assays for the detection of Ridgway’s rail (Rallus obsoletus) in the United States Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-09-22 Xin Guan, Richard F. Lance, Sheena M. Feist
We designed two novel environmental DNA (eDNA) assays for the detection of Ridgway’s Rail (Rallus obsoletus), and successfully validated each assay using eDNA samples collected from the species’ known distribution within the United States. These assays add to the suite of tools available for the monitoring of this rare and secretive marsh bird, and may help to further elucidate its movement patterns
-
Isolation and characterization of 32 SNP markers in Spinibarbus hollandi based on restriction site-associated DNA sequencing (RADseq) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-09-16 Wenwei Huang, Jiangwei Zhou, Huawei Zhan, Yuying Zhang, Suhan Peng, Wenjun Li, Zusheng Yi, Lin Gui, Chong Han, Qiang Li
Spinibarbus hollandi (Cyprinidae, Barbinae) is an economically important species and widely distributed in numbers of rivers throughout South China. However, wild S. hollandi resources have declined sharply in recent years as a result of over fishing, environmental pollution and other human disturbance. Therefore, it is extremely urgent to protect germplasm resource of S. hollandi. In this study, 32
-
Identifying sex and individual from faecal DNA of the Asian elephant using a single multiplex PCR for population monitoring Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-09-11 Rahul De, Reeta Sharma, Parag Nigam, Amirtharaj Christy Williams, Bilal Habib, Surendra Prakash Goyal
-
A method for identifying nine tuna and tuna-like species (tribe Thunnini) by using high-resolution melting analysis based on genotyping single nucleotide polymorphisms in mitochondrial DNA Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-08-22 Hirohiko Takeshima, Kotomi Yamaura, Natsumi Kuboshima, Miyu Hiramatsu, Chisato Kameya, Kenji Nohara, Kay Sakuma, Satoru N. Chiba, Atsushi Tawa, Nobuaki Suzuki
-
Unveiling the demographic background and genetic diversity of Urochloa mosambicensis (Poaceae) through genome-wide identification of simple sequence repeats and molecular marker development Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-08-21 Ueslei S. Leão, Luice G. Bueno, Aline B. Negreiros, Geice R. Silva, Rodrigo Maggioni, Fabio B. Britto, Jose L. R. Sarmento, Diego B. Galvani, Fábio M. Diniz
-
A PCR assay for the detection of introduced Vallisneria spiralis, V. denseserrulata and their hybrids Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-08-21 Michael D. Tringali, Siobhan B. Gorham, Seifu Seyoum, Cecilia Puchulutegui, Margaret S. Bass, Bradley T. Furman, Craig Mallison
-
Shed skin as a source of DNA for genotyping-by-sequencing (GBS) in reptiles Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-08-11 Thomas D Brekke, Liam Shier, Matthew J Hegarty, John F Mulley
-
Development of a set of SNP markers for population genetics of the sea peach (Halocynthia papillosa) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-08-09 M. Padrón, M. Milhes, A. Delcamp, E. Guichoux, K. Guizien
A set of single nucleotide polymorphism (SNP) markers was developed from the transcriptome of the solitary ascidian Halocynthia papillosa. 1399 putative SNPs with coverage larger than 100 reads were identified, and a selected set of 320 SNPs was tested using a MassARRAY System on 95 samples from the NW Mediterranean. A total of 175 SNPs were successfully genotyped, polymorphic and in Hardy-Weinberg
-
SNP+ to predict dropout rates in SNP arrays Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-07-08 N. Sastre, A. Mercadé, J. Casellas
-
Validation of a species-specific probe-based qPCR assay for the threatened meltwater stonefly, Lednia tumana, in environmental samples Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-07-03 Patrick R. Hutchins, Jonathan J. Giersch, Adam J. Sepulveda, Clint C. Muhlfeld
A probe-based quantitative real-time PCR assay was developed to detect meltwater stonefly (Lednia tumana) environmental (e)DNA in water samples. The limits of detection and quantification, respectively, were 12.1 and 58.4 gene copies for calibration standards and these values were similarly low in a relevant environmental sample matrix (8.6 and 174.2, respectively). The assay’s utility was demonstrated
-
Development of a quantitative PCR assay for detecting northwest salamander (ambystoma gracile) in environmental DNA samples Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-07-03 Marshal S. Hoy, Carl O. Ostberg
We developed a primer and probe based quantitative PCR assay for use with environmental DNA to detect Northwest salamander (Ambystoma gracile), a species endemic to the temperate Pacific coastal region of North America. The assay targets a region in the mitochondrial DNA (mtDNA) D-loop gene. Tests of the assay were performed in silico (using the NCBI BLAST tool), in vitro (using DNA extracted from
-
Development and testing of diagnostic molecular markers to differentiate among three species of Salvelinus: Arctic char, Dolly Varden, and Bull trout Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-06-03 Amy Liu, Armando Geraldes, Eric B. Taylor
-
Is what you see what you get? Assessing external morphological identification of devil rays captured by small-scale fisheries in northern Peru using DNA barcoding Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-06-02 Eliana Alfaro-Cordova, Rosa María Cañedo-Apolaya, Joanna Alfaro-Shigueto, Jeffrey C. Mangel, Omar Carrillo, David Sarmiento, Ximena Velez-Zuazo
-
Development and characterization of 50 SNP markers in three watersheds populations of Xenocypris davidi Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-05-17 Chaoqun Su, Chenxi Tan, Liangjie Zhao, Xinliang Peng, Jun Liu, Haolong Li, Xusheng Guo
Xenocypris davidi is an ecologically important fish species that is widely distributed in China. However, the natural genetic diversity of X. davidi has dramatically declined in recent years owing to over-harvesting and water pollution. Data regarding the genetic markers in this species are scarce. In this study, 50 single nucleotide polymorphism (SNP) markers of X. davidi were newly developed using
-
Increased sample size provides novel insights into population structure of Mediterranean loggerhead sea turtles Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-05-13 Arzu Kaska, Gizem Koç, Doğan Sözbilen, Diryaq Salih, Ashraf Glidan, Abd Alati Elsowayeb, Almokhtar Saied, Dimitris Margaritoulis, Panagiota Theodorou, ALan Rees, Robin Snape, Annette Broderick, Brendan Godley, Damla Beton, Meryem Ozkan, Imed Jribi, Manel Ben Ismail, Ahmed Ben Hmida, Ali Badreddine, Enerit Sacdanaku, Vicky Rae, Mohamed Said Abdelwarith, Nahla Naguib, Lobna Ben Nakhla, Atef Limam, Marwan
-
Isolation and characterization of 46 SNP markers in Gymnocypris chilianensis Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-05-04 Ya Liu, Wenqiong Wu, Siyi Zhu, Yeyu Chen, Xiaoyun Wu, Jiansheng Lai, Mingjiang Song, Feiyang Li, Qiang Li
In the present study, we identified 46 SNP markers for Gymnocypris chilianensis, an endemic economic fish in Heihe River and Shule River in China. The minor allele frequency ranged from 0.028 to 0.500. Observed heterozygosity ranged from 0.028 to 1.000, and expected heterozygosity from 0.055 to 0.507. The polymorphic information content ranged between 0.053 and 0.375. Among these SNP markers, sixteen
-
A validated targeted assay for environmental DNA detections of the Atlantic wolffish (Anarhichas lupus) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-05-04 Marion Chevrinais, Geneviève J. Parent
-
Development of a microhaplotype panel to inform management of gray wolves Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-04-19 Thomas A. Delomas, Jennifer Struthers, Tricia Hebdon, Matthew R. Campbell
-
Shallow sequencing can mislead when evaluating hybridization capture methods Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-04-01 Lauren C. White
-
Cost-effective library preparation for whole genome sequencing with feather DNA Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-04-01 Teia M. Schweizer, Matthew G. DeSaix
-
Development and characterization of 165 SNP markers in Mimosa bimucronata (Candolle) O. Kuntze Conserv. Genet. Resour. (IF 1.1) Pub Date : 2023-02-28 Qian Wang, Chun-Jing Wang, Ji-Zhong Wan
Mimosa bimucronata (Candolle) O. Kuntze, native to the American tropics, is the worst invasive tree species in China, where it is distributed in the southern coastal areas of Guangdong and Fujian provinces. It is characterized by rapid growth and waterlogging resistance, and was introduced in China for slope and bank protection. However, there is still a lack of effective molecular markers for its
-
Development and characterization of 148 SNP markers in the caribbean symmetrical brain coral Pseudodiploria strigosa Conserv. Genet. Resour. (IF 1.1) Pub Date : 2022-11-16 Alicia A. Vollmer, Michael D. Tringali, Melissa S. Allen
As coral reefs decline, restoring lost coral populations has been hampered due to the paucity of genetic information available for many coral species. In the Caribbean, the symmetrical brain coral Pseudodiploria strigosa, a prominent framework builder of the reef, has experienced an accelerated decline due to stony coral tissue loss disease (SCTLD). Colonies of P. strigosa gene-banked in response to
-
Development and identification of 131 SNP markers in Sthenoteuthis pteropus (Steenstrup) Conserv. Genet. Resour. (IF 1.1) Pub Date : 2022-11-15 Yan Zhao, Congcong Wang, Bilin Liu, Gang Li, Hao Xu
The orangeback flying squid, Sthenoteuthis pteropus, is a species of significant potential value that is widely distributed in the tropical and temperate waters of the Atlantic Ocean. There have been no reports of the population genetics and effective molecular markers for this species due to a lack of reliable information regarding its genetic structure and its many individual differences, as well
-
Identification of cetaceans from bones using molecular techniques provides insights into cetacean species diversity and composition in coastal western Taiwan Strait waters, China Conserv. Genet. Resour. (IF 1.1) Pub Date : 2022-11-12 Yufei Dai, Liyuan Zhao, Fuxing Wu, Xing Miao, Qianhui Zeng, Xianyan Wang
-
Environmental DNA metabarcoding reveals the biological community structure in Poyang Lake, China Conserv. Genet. Resour. (IF 1.1) Pub Date : 2022-11-10 Chunhua Zhou, Jinping Chen, Ting Guo, Shan Ouyang, Xiaoping Wu
-
Development of 45 SNP markers in Triplophysa hsutschouensis based on RAD sequencing Conserv. Genet. Resour. (IF 1.1) Pub Date : 2022-09-20 Ya Liu, Jiansheng Lai, Zhongmeng Zhao, Hongyu Ke, Han Zhao, Yeyu Chen, Xiaoyun Wu, Qiang Li
Triplophysa hsutschouensis is an endemic species in China, that is mainly distributed in the Hexi Corridor of Gansu Province. Studies on molecular markers in this species are limited. 45 single nucleotide polymorphism markers were developed and characterized in T. hsutschouensis for the first time using restriction site-associated DNA tag sequencing. The minor allele frequency ranged from 0.033 to