Abstract
Promoter methylation is one of the most studied epigenetic modifications and it is highly relevant to the onset and progression of thyroid carcinoma (THCA). This study investigates the promoter methylation and expression pattern of intercellular adhesion molecule 5 (ICAM5) in THCA. CpG islands with aberrant methylation pattern in THCA, and the expression profiles of the corresponding genes in THCA, were analyzed using bioinformatics. ICAM5 was suggested to have a hypermethylation status, and it was highly expressed in THCA tissues and cells. Its overexpression promoted proliferation, mobility, and tumorigenic activity of THCA cells. As for the downstream signaling, ICAM5 was found to activate the MAPK/ERK and MAPK/JNK signaling pathways. Either inhibition of ERK or JNK blocked the oncogenic effects of ICAM5. DNA methyltransferases 1 (DNMT1) and DNMT3a were found to induce promoter hypermethylation of ICAM5 in THCA cells. Knockdown of DNMT1 or DNMT3a decreased the ICAM5 expression and suppressed malignant properties of THCA cells in vitro and in vivo, which were, however, restored by further artificial ICAM5 overexpression. Collectively, this study reveals that DNMT1 and DNMT3a mediates promoter hypermethylation and transcription activation of ICAM5 in THCA, which promotes malignant progression of THCA through the MAPK signaling pathway.
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References
Cao Y et al (2022) UCHL5 promotes proliferation and migration of bladder cancer cells by activating c-Myc via AKT/mTOR signaling. Cancers (Basel) 14 https://doi.org/10.3390/cancers14225538
Castelo-Branco P et al (2013) Methylation of the TERT promoter and risk stratification of childhood brain tumours: an integrative genomic and molecular study. Lancet Oncol 14:534–542. https://doi.org/10.1016/S1470-2045(13)70110-4
Chen D, Jiang X, Luo H, Hua Q, Zhang F (2022) CircPTPRM accelerates malignancy of papillary thyroid cancer via miR-885–5p/DNMT3A axis. J Clin Lab Anal 36:e24688. https://doi.org/10.1002/jcla.24688
Cheng K et al (2019) Calsyntenin-1 negatively regulates ICAM5 accumulation in postsynaptic membrane and influences dendritic spine maturation in a mouse model of fragile X syndrome. Front Neurosci 13:1098. https://doi.org/10.3389/fnins.2019.01098
Cui Y, Luo J, Bai N, Yu Z (2023) Deltex E3 ubiquitin ligase 4 promotes thyroid cancer progression through stearoyl-CoA desaturase 1. Funct Integr Genomics 23:280. https://doi.org/10.1007/s10142-023-01215-9
Durham BH, Diamond EL, Abdel-Wahab O (2016) Histiocytic neoplasms in the era of personalized genomic medicine. Curr Opin Hematol 23:416–425. https://doi.org/10.1097/MOH.0000000000000256
Godlewska M, Banga PJ (2019) Thyroid peroxidase as a dual active site enzyme: Focus on biosynthesis, hormonogenesis and thyroid disorders of autoimmunity and cancer. Biochimie 160:34–45. https://doi.org/10.1016/j.biochi.2019.02.003
Guilleret I, Yan P, Grange F, Braunschweig R, Bosman FT, Benhattar J (2002) Hypermethylation of the human telomerase catalytic subunit (hTERT) gene correlates with telomerase activity. Int J Cancer 101:335–341. https://doi.org/10.1002/ijc.10593
Hahn MA, Pfeifer GP (2010) Methods for genome-wide analysis of DNA methylation in intestinal tumors. Mutat Res 693:77–83. https://doi.org/10.1016/j.mrfmmm.2009.10.005
Kato Y et al (2007) Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse. Hum Mol Genet 16:2272–2280. https://doi.org/10.1093/hmg/ddm179
Kulis M, Esteller M (2010) DNA methylation and cancer. Adv Genet 70:27–56. https://doi.org/10.1016/B978-0-12-380866-0.60002-2
Laha D, Nilubol N, Boufraqech M (2020) New therapies for advanced thyroid cancer. Front Endocrinol (Lausanne) 11:82. https://doi.org/10.3389/fendo.2020.00082
Lai WA, Liu CY, Lin SY, Chen CC, Hang JF (2020) Characterization of driver mutations in anaplastic thyroid carcinoma identifies RAS and PIK3CA mutations as negative survival predictors. Cancers (Basel) 12. https://doi.org/10.3390/cancers12071973
Lee DD et al (2019a) DNA hypermethylation within TERT promoter upregulates TERT expression in cancer. J Clin Invest 129:1801. https://doi.org/10.1172/JCI128527
Lee DD et al (2019b) DNA hypermethylation within TERT promoter upregulates TERT expression in cancer. J Clin Invest 129:223–229. https://doi.org/10.1172/JCI121303
Li X, Cheng R (2023) TPO as an indicator of lymph node metastasis and recurrence in papillary thyroid carcinoma. Sci Rep 13:10848. https://doi.org/10.1038/s41598-023-37932-1
Long K, Nguyen LT (2013) Roles of vitamin D in amyotrophic lateral sclerosis: possible genetic and cellular signaling mechanisms. Mol Brain 6:16. https://doi.org/10.1186/1756-6606-6-16
Maruya SI, Myers JN, Weber RS, Rosenthal DI, Lotan R, El-Naggar AK (2005) ICAM-5 (telencephalin) gene expression in head and neck squamous carcinoma tumorigenesis and perineural invasion! Oral Oncol 41:580–588. https://doi.org/10.1016/j.oraloncology.2005.01.002
Maunakea AK et al (2010) Conserved role of intragenic DNA methylation in regulating alternative promoters. Nature 466:253–257. https://doi.org/10.1038/nature09165
Miasaki FY et al (2008) Retinoic acid receptor beta2 re-expression and growth inhibition in thyroid carcinoma cell lines after 5-aza-2’-deoxycytidine treatment. J Endocrinol Invest 31:724–730. https://doi.org/10.1007/BF03346422
Mokarram P et al (2009) Distinct high-profile methylated genes in colorectal cancer. PLoS ONE 4:e7012. https://doi.org/10.1371/journal.pone.0007012
Moore LD, Le T, Fan G (2013) DNA methylation and its basic function. Neuropsychopharmacology 38:23–38. https://doi.org/10.1038/npp.2012.112
Nishiyama A, Nakanishi M (2021) Navigating the DNA methylation landscape of cancer. Trends Genet 37:1012–1027. https://doi.org/10.1016/j.tig.2021.05.002
Pan T et al (2022) DNMT1-mediated demethylation of lncRNA MEG3 promoter suppressed breast cancer progression by repressing Notch1 signaling pathway. Cell Cycle 21:2323–2337. https://doi.org/10.1080/15384101.2022.2094662
Park HB, Baek KH (2022) E3 ligases and deubiquitinating enzymes regulating the MAPK signaling pathway in cancers. Biochim Biophys Acta Rev Cancer 1877:188736. https://doi.org/10.1016/j.bbcan.2022.188736
Ren Y (2022) Regulatory mechanism and biological function of UHRF1-DNMT1-mediated DNA methylation. Funct Integr Genomics 22:1113–1126. https://doi.org/10.1007/s10142-022-00918-9
Ren W, Gao L, Song J (2018) Structural basis of DNMT1 and DNMT3A-mediated DNA methylation. Genes (Basel) 9. https://doi.org/10.3390/genes9120620
Rodger EJ, Chatterjee A, Stockwell PA, Eccles MR (2019) Characterisation of DNA methylation changes in EBF3 and TBC1D16 associated with tumour progression and metastasis in multiple cancer types. Clin Epigenetics 11:114. https://doi.org/10.1186/s13148-019-0710-5
Schlumberger M, Leboulleux S (2021) Current practice in patients with differentiated thyroid cancer. Nat Rev Endocrinol 17:176–188. https://doi.org/10.1038/s41574-020-00448-z
Seib CD, Sosa JA (2019) Evolving understanding of the epidemiology of thyroid cancer. Endocrinol Metab Clin North Am 48:23–35. https://doi.org/10.1016/j.ecl.2018.10.002
Shen W et al (2018) ICAM3 mediates inflammatory signaling to promote cancer cell stemness. Cancer Lett 422:29–43. https://doi.org/10.1016/j.canlet.2018.02.034
Smith J, Sen S, Weeks RJ, Eccles MR, Chatterjee A (2020) Promoter DNA hypermethylation and paradoxical gene activation. Trends Cancer 6:392–406. https://doi.org/10.1016/j.trecan.2020.02.007
Sung H, Ferlay J, Siegel RL, Laversanne M, Soerjomataram I, Jemal A, Bray F (2021) Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries. CA Cancer J Clin 71:209–249. https://doi.org/10.3322/caac.21660
Wang K, Xu J, Zhao L, Liu S, Liu C, Zhang L (2020) Prognostic lncRNA, miRNA, and mRNA Signatures in Papillary Thyroid Carcinoma. Front Genet 11:805. https://doi.org/10.3389/fgene.2020.00805
Xie F, Wang J, Zhang B (2023) RefFinder: a web-based tool for comprehensively analyzing and identifying reference genes. Funct Integr Genomics 23:125. https://doi.org/10.1007/s10142-023-01055-7
Xing M (2007) Gene methylation in thyroid tumorigenesis. Endocrinology 148:948–953. https://doi.org/10.1210/en.2006-0927
Xing M (2013) Molecular pathogenesis and mechanisms of thyroid cancer. Nat Rev Cancer 13:184–199. https://doi.org/10.1038/nrc3431
Yang F, Yu Y, Zhou H, Zhou Y (2023) Prognostic subtypes of thyroid cancer was constructed based on single cell and bulk-RNA sequencing data and verified its authenticity. Funct Integr Genomics 23:89. https://doi.org/10.1007/s10142-023-01027-x
Ye D et al (2023) DNMT3a-dermatopontin axis suppresses breast cancer malignancy via inactivating YAP. Cell Death Dis 14:106. https://doi.org/10.1038/s41419-023-05657-8
Zaballos MA, Santisteban P (2017) Key signaling pathways in thyroid cancer. J Endocrinol 235:R43–R61. https://doi.org/10.1530/JOE-17-0266
Zafon C, Gil J, Perez-Gonzalez B, Jorda M (2019) DNA methylation in thyroid cancer. Endocr Relat Cancer 26:R415–R439. https://doi.org/10.1530/ERC-19-0093
Zhang Y, Sun B, Huang Z, Zhao DW, Zeng Q (2018) Shikonin Inhibites Migration and Invasion of Thyroid Cancer Cells by Downregulating DNMT1. Med Sci Monit 24:661–670. https://doi.org/10.12659/msm.908381
Zhang H et al (2022) Identification of a fibroblast-related prognostic model in glioma based on bioinformatics methods. Biomolecules 12. https://doi.org/10.3390/biom12111598
Zhu X et al (2022) DNMT1 facilitates growth of breast cancer by inducing MEG3 hyper-methylation. Cancer Cell Int 22:56. https://doi.org/10.1186/s12935-022-02463-8
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ZBL conceived the study and conducted the main experiments; YY and XTZ were responsible for data collection; JFL and YX conducted the part of the experiments, ZFD and ZQH analyzed and interpreted the data; JJY wrote the manuscript and revised the manuscript and important intellectual content. All authors read and approved the final manuscript.
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The use of human samples was approved by the Institutional Review Board of the First Affiliated Hospital of Gannan Medical College (Approval No. LLSC-2020041215; approved date: 2020.04.12). All included patients signed an informed consent form. All experimental procedures were performed following the guidelines of Declaration of Helsinki. All procedures in our animal experiments were approved by the Animal Ethics and Welfare Committee of the First Affiliated Hospital of Gannan Medical College (Approval No. LLSC-2021082304; approved date: 2021.08.23) and were performed in line with the Guide for the Care and Use of Laboratory Animals: Eighth Edition (2011).
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Li, Z., Ying, Y., Zeng, X. et al. DNMT1/DNMT3a-mediated promoter hypermethylation and transcription activation of ICAM5 augments thyroid carcinoma progression. Funct Integr Genomics 24, 12 (2024). https://doi.org/10.1007/s10142-024-01293-3
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DOI: https://doi.org/10.1007/s10142-024-01293-3