Skip to main content
Log in

Early-onset dysphagia and severe neurodevelopmental disorder as early signs in a patient with two novel variants in NARS1: a case report and brief review of the literature

  • Brief Communication
  • Published:
Neurogenetics Aims and scope Submit manuscript

Abstract

Aminoacyl-tRNA synthetases (ARSs) aminoacylate tRNA molecules with their cognate amino acid, enabling information transmission and providing substrates for protein biosynthesis. They also take part in nontranslational functions, mediated by the presence of other proteins domains. Mutations in ARS genes have been described as responsive to numerous factors, including neurological, autoimmune, and oncological. Variants of the ARS genes, both in heterozygosity and homozygosity, have been reported to be responsible for different pathological pictures in humankind. We present the case of a patient referred in infancy for failure to thrive and acquired microcephaly (head circumference: -5 SD). During follow-up we highlighted: dysphagia (which became increasingly severe until it became incompatible with oral feeding, with gastrostomy implantation, resulting in resolution of feeding difficulties), strabismus, hypotonia. NCV (Nerve Conduction Velocity) showed four limbs neuropathy, neurophysiological examination performed at 2 years of age mainly sensory and demyelinating. Exome sequencing (ES) was performed, detecting two novel compound heterozygous variants in the NARS1 gene (OMIM *108410): NM_004539:c.[662 A > G]; [1155dup], p.[(Asn221Ser)]; [(Arg386Thrfs*19)], inherited from mother and father respectively. In this article, we would like to focus on the presence of progressive dysphagia and severe neurodevelopmental disorder, associated with two novel variants in the NARS1 gene.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

Data availability

Data are available by contacting the corresponding author by email, upon reasonable request.

References

  1. Raina M, Ibba M (2014) tRNAs as regulators of biological processes. Front Genet 5:171. https://doi.org/10.3389/fgene.2014.00171

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Hausmann CD, Ibba M (2008) Aminoacyl-tRNA synthetase complexes: molecular multitasking revealed. FEMS Microbiol Rev 32(4):705–721. https://doi.org/10.1111/j.1574-6976.2008.00119.x

    Article  CAS  PubMed  Google Scholar 

  3. Guo M, Schimmel P (2013) Essential nontranslational functions of tRNA synthetases. Nat Chem Biol 9(3):145–153. https://doi.org/10.1038/nchembio.1158

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Antonellis A, Green ED (2008) The role of aminoacyl-tRNA synthetases in genetic diseases. Annu Rev Genom Hum Genet 9:87–107. https://doi.org/10.1146/annurev.genom.9.081307.164204

    Article  CAS  Google Scholar 

  5. Meyer-Schuman R, Antonellis A (2017) Emerging mechanisms of aminoacyl-tRNA synthetase mutations in recessive and dominant human disease. Hum Mol Genet 26(R2):R114–R127. https://doi.org/10.1093/hmg/ddx231

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Wang L, Li Z, Sievert D, Smith DEC, Mendes MI, Chen DY, Stanley V, Ghosh S, Wang Y, Kara M, Aslanger AD, Rosti RO, Houlden H, Salomons GS, Gleeson JG (2020) Loss of NARS1 impairs progenitor proliferation in cortical brain organoids and leads to microcephaly. Nat Commun 11(1):4038. https://doi.org/10.1038/s41467-020-17454-4

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Blocquel D, Li S, Wei N, Daub H, Sajish M, Erfurth ML, Kooi G, Zhou J, Bai G, Schimmel P, Jordanova A, Yang XL (2017) Alternative stable conformation capable of protein misinteraction links tRNA synthetase to peripheral neuropathy. Nucleic Acids Res 45(13):8091–8104. https://doi.org/10.1093/nar/gkx455

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL, ACMG Laboratory Quality Assurance Committee (2015) Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Medicine: Official J Am Coll Med Genet 17(5):405–424. https://doi.org/10.1038/gim.2015.30

    Article  Google Scholar 

  9. Manole A, Efthymiou S, O’Connor E, Mendes MI, Jennings M, Maroofian R, Davagnanam I, Mankad K, Lopez MR, Salpietro V, Harripaul R, Badalato L, Walia J, Francklyn CS, Athanasiou-Fragkouli A, Sullivan R, Desai S, Baranano K, Zafar F, Rana N, Houlden H (2020) De Novo and bi-allelic pathogenic variants in NARS1 cause Neurodevelopmental Delay due to toxic gain-of-function and partial loss-of-function effects. Am J Hum Genet 107(2):311–324. https://doi.org/10.1016/j.ajhg.2020.06.016

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Shafique A, Sultan T, Alzahrani F, Hun Seo G, Alkuraya FS, Naz S (2023) Genomic analysis of multiplex consanguineous families reveals causes of neurodevelopmental disorders with epilepsy. Gene 879:147599. https://doi.org/10.1016/j.gene.2023.147599

    Article  CAS  PubMed  Google Scholar 

  11. Beijer D, Marte S, Li JC, De Ridder W, Chen JZ, Tadenev ALD, Miers KE, Deconinck T, Macdonell R, Marques W Jr, De Jonghe P, Pratt SL, Meyer-Schuman R, Züchner S, Antonellis A, Burgess RW, Baets J (2024) Dominant NARS1 mutations causing axonal Charcot-Marie-tooth disease expand NARS1-associated diseases. Brain Commun 6(2):fcae070. https://doi.org/10.1093/braincomms/fcae070

    Article  PubMed  Google Scholar 

  12. Cohen T, Gluzman-Poltorak Z, Brodzky A, Meytal V, Sabo E, Misselevich I, Hassoun M, Boss JH, Resnick M, Shneyvas D, Eldar S, Neufeld G (2001) Neuroendocrine cells along the digestive tract express neuropilin-2. Biochem Biophys Res Commun 284(2):395–403. https://doi.org/10.1006/bbrc.2001.4958

    Article  CAS  PubMed  Google Scholar 

  13. Radocchia G, Marazzato M, Harbi KB, Capuzzo E, Pantanella F, De Giorgio R, Guarino M, Costanzini A, Zenzeri L, Parisi P, Ferretti A, Felici E, Palamara AT, Di Nardo G, Schippa S (2024) Chronic intestinal pseudo-obstruction: associations with gut microbiota and genes expression of intestinal serotonergic pathway. BMC Microbiol 24(1):48. https://doi.org/10.1186/s12866-024-03200-z

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgements

This work was generated within the European Reference Network on Rare Congenital Malformations and Rare Intellectual Disability (ERN-ITHACA) (EU Framework Partnership Agreement ID: 3HP-HP-FPA ERN-01-2016/739516). The authors also wish to thank the patient’s family members for their cooperation in providing the medical data for this publication. We thank the nurses from the Child Neurology and Psychiatry Unit and Medical Genetics Unit for their cooperation.

Funding

Not applicable.

Author information

Authors and Affiliations

Authors

Contributions

Conceptualization, CAC, GC, FC, CS, CF; clinical data collection and data curation, CAC, GC, CS, FC, SGC, AL, CS, DF, SR, AC, LG, CF; writing—original draft preparation, CAC, GC, CS, FC, SGC, CS; writing—review and editing, CAC, GC, CS, SGC; supervision, LG, CF. All authors have read and agreed to the published version of the manuscript.

Corresponding author

Correspondence to Carlo Alberto Cesaroni.

Ethics declarations

Ethical approval

The authors declare that this paper complies with internationally accepted standards for research practice and reporting. Written informed consent to participate and written consent to publish were obtained from the patient’s parents for the publication of this report.

Competing interests

The authors declare no competing interests.

Additional information

Publisher’s Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary Material 1

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Cesaroni, C.A., Contrò, G., Spagnoli, C. et al. Early-onset dysphagia and severe neurodevelopmental disorder as early signs in a patient with two novel variants in NARS1: a case report and brief review of the literature. Neurogenetics (2024). https://doi.org/10.1007/s10048-024-00760-0

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s10048-024-00760-0

Keywords

Navigation